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Generate the DE plot plot panel of the shiny app

Source: R/DEplotPanel.R
DEplotPanel.Rd

These are the UI and server components of the DE plot panel of the shiny app. It is generated by including 'DEplot' in the panels.default argument of generateShinyApp.

Usage

DEplotPanelUI(id, show = TRUE)

DEplotPanelServer(id, DEresults, anno)

Arguments

id

the input slot that will be used to access the value

show

whether to show the panel or not; default is TRUE; there for compatibility with specifying panels to show

DEresults

differential expression results output from DEpanelServer; a reactive list with slots 'DEtable' (all genes), 'DEtableSubset' (only DE genes), 'lfcThreshold' and 'pvalThreshold'

anno

annotation data frame containing a match between the row names of the expression.matrix (usually ENSEMBL IDs) and the gene names that should be rendered within the app and in output files; this object is created by generateShinyApp using the org.db specified

Value

The UI and Server components of the shiny module, that can be used within the UI and Server definitions of a shiny app.