Plots module connectivity as a tree-like graph.
Usage
plot_module_transitions(
module_adj_matrix,
closest_module,
start_module = NULL,
edge_size = 0.5,
edge_alpha = 0.5,
edge_colour = "black",
node_size = 3,
node_colours = "white",
node_label_size = 3,
node_label_vjust = -1
)Arguments
- module_adj_matrix
A module adjacency matrix.
- closest_module
Named vector mapping modules to closest nodes.
- start_module
Optional module name used as graph root.
- edge_size
Edge width.
- edge_alpha
Edge transparency.
- edge_colour
Edge colour.
- node_size
Node size.
- node_colours
Node fill colour.
- node_label_size
Node-label text size.
- node_label_vjust
Vertical adjustment for node labels.